Publikationen

Adeoye, O. O., Tom-Aba, D., Ameh, C. A., Ojo, O. E., Ilori, E. A., Gidado, S. O., Waziri, E. N., Nguku, P. M., Mall, S., Denecke, K., Lamshoeft, M., Schwarz, N. G., Krause, G. & Poggensee, G. (2017). Implementing Surveillance and Outbreak Response Management and Analysis System (SORMAS) for Public Health in West Africa-Lessons Learnt and Future Direction. International Journal of TROPICAL DISEASE & Health, 22 (2), 1-17. doi: 10.9734/IJTDH/2017/31584

Bürkle, T., Denecke, K., Zetz, E., Lehmann, M. & Holm, H. (2017). Integrated Care Processes Designed for the Future Healthcare System. Stud Health Technol Inform., 245, 20-24. doi: 10.3233/978-1-61499-830-3-20

Castellanos, I., Martin, M., Kraus, S., Bürkle, T., Prokosch, H.U., Schüttler, J. & Toddenroth, D. (2017). Effects of staff training and electronic event monitoring on long-term adherence to lung-protective ventilation recommendations. Journal of Critical Care, 43, 13-20. doi: 10.1016/j.jcrc.2017.06.02

Denecke, K. (2017). A Mobile System for Music Anamnesis and Receptive Music Therapy in the Personal Home. Stud Health Technol Inform., 245, 54-58. doi: 10.3233/978-1-61499-830-3-54

Denecke, K. (2017). An ethical assessment model for digital disease detection technologies. Life Sciences, Society and Policy, 13 (1): 16, 1-11. doi: 10.1186/s40504-017-0062-x

Denecke, K. (2017). Concept-Based Retrieval from Critical Incident Reports. Studies in Health Technology and Informatics, 236, 1-7. doi: 10.3233/978-1-61499-759-7-1

Denecke, K., Lehmann, M. & Holm, J. (2017). Wir sind (auch) Berliner!. Studierende der Berner Fachhochschule durchforsteten die conhIT. Clinicum, (3/17), 22-31.

Denecke, K., Dorner, T. L., Iseli, R., Mele, S., Tschanz, M., Viehl, C. T., Lehmann, M. & Bürkle, T. (2017). A Mobile Cancer Follow-up Care Plan for Patient Empowerment. J Health Med Informat, 8 (3), 268-273. doi: 10.4172/2157-7420.1000268

Deng, Y. & Denecke, K. (2017). Patient Records Retrieval System for Integrated Care in Treatment of Cervical Spine Defects. In: Wang F, Yao L, Luo G (eds.): Proceedings for the Second International Workshop on Data Management and Analytics for Medicine and Healthcare (DMAH 2016) (pp. 10-25), Cham: Springer Lecture Notes in Computer Science, vol 10186. ISBN: 978-3-319-57740-1, ISBN online: 978-3-319-57741-8

Deng, Y., Bürkle, T. & Denecke, K. (2017). Who should be empowered for an efficient first diagnosis?. Patient or general practitioner? 62. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e. V. (GMDS), 17.-21.09.2017, Oldenburg, Deutschland.

Deng, Y., Faulstich, L. & Denecke, K. (2017). Concept Embedding for Relevance Detection of Search Queries Regarding CHOP. Stud Health Technol Inform., 245, 1260-1260. doi: 10.3233/978-1-61499-830-3-1260
Holm, J. (2017). Die vermessene Gesundheit. Schweizer Monat, (1050), 72-74.

Holm, J. (2017). Die vermessene Gesundheit. Schweizer Monat, (1050), 72-74.

Kropf, S., Chalopin, C., Lindner, D. & Denecke, K. (2017). Domain Modeling and Application Development of an Archetype- and XML-based EHRS. Practical Experiences and Lessons Learnt. Applied Clinical Informatics, 8 (2), 660-679. doi: 10.4338/ACI-2017-01-RA-000

Kropf, S., Krücken, P., Mueller, W. & Denecke, K. (2017). Structuring Legacy Pathology Reports by openEHR Archetypes to Enable Semantic Querying. Methods of Information in Medicine, 56 (3), 230-237. doi: 10.3414/ME16-01-0073

Lehmann, M. & Holm, J. (2017). Im Alter schützt das Smarthome dich. eco2friendly, Herbst / Winter 2017, 24-26.

McMurry, J. A., Juty, N., Blomberg, N., Burdett, T., Conlin, T., Conte, N., Courtot, M., Deck, J., Dumontier, M., Fellows, D. K., Gonzalez-Beltran, A., Gormanns, P., Grethe, J., Hastings, J., Hériché, J. K., Hermjakob, H., Ison, J. C., Jimenez, R. C., Jupp, S., Kunze, J., Laibe, C., Le Novère, N., Malone, J., Martin, M. J., McEntyre, J. R., Morris, C., Muilu, J., Müller, W., Rocca-Serra, P., Sansone, S. A., Sariyar, M., Snoep, J. L., Soiland-Reyes, S., Stanford, N. J., Swainston, N., Washington, N., Williams, A. R., Wimalaratne, S. M., Winfree, L. M., Wolstencroft, K., Goble, C., Mungall, C. J., Haendel, M. A. & Parkinson, H. (2017). Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data. PLOS Biology, 15 (6). doi: 10.1371/journal.pbio.2001414. eCollection 2017 Jun.

Meystre, S. M., Lovis, C., Bürkle, T., Tognola, G., Budrionis, A. & Lehmann, C.U. (2017). Clinical Data Reuse or Secondary Use: Current Status and Potential Future Progress. Yearb Med Inform 2017, 26(01), 38-52. doi: 10.15265/IY-2017-007

Murbach, M., Martin, S., Denecke, K. & Nüssli, S. (2017). A First Standardized Swiss Electronic Maternity Record. Studies in Health Technology and Informatics, 236, 248-253. doi: 10.3233/978-1-61499-759-7-248

Plank-Kiegele, B., Bürkle, T., Müller, F., Patapovas, A., Sonst, A., Pfistermeister, B., Dormann, H. & Maas, R. (2017). Data Requirements for the Correct Identification of Medication Errors and Adverse Drug Events in Patients Presenting at an Emergency Department. Methods of Information in Medicine, 56 (4), 276-282. doi: h10.3414/ME16-01-0126

Prasser, F. & Sariyar, M. (2017). Anonymisierung medizinischer Individualdaten. In: J. Drepper, S. Semler (Eds.): IT-Infrastrukturen in der patientenorientierten Forschung. Aktueller Stand und Handlungsbedarf. Verfasst und vorgelegt vom IT-Reviewing-Board der TMF. 2017; AKA.

Sariyar, M. & Walser, K. (2017). Potenziale von Big-Data im Gesundheitswesen. SocietyByte, Mai 2017, 1-5.

Sariyar, M., Suhr, S. & Schlünder, I. (2017). How Sensitive Is Genetic Data? Biopreservation and Biobanking. doi: 10.1089/bio.2017.0033.

Tschanz, M., Dorner, T. L. & Denecke, K. (2017). eMedication Meets eHealth with the Electronic Medication Management Assistant (eMMA). Studies in Health Technology and Informatics, 236, 196-203. doi: 10.3233/978-1-61499-759-7-196

Zahnd, D. (2017). Weiterbildungen mit direktem Impact auf die Einführung des elektronischen Patientendossiers (EPD). Focus 30.

Zahnd, D. & Weiss, F. (2017). Konzept eLearning-Angebot zum elektronischen Patientendossier EPD. Bericht im Auftrag des Koordinationsorgans eHealth Suisse, Bern

Bignens, S. (2016). Eine grosse Diskussion im Rahmen des ePatientendossiers und der Communities: eHealth, make or buy? clinicum 2-16, 132-134.

Denecke K. (2016). Integrating Social Media and Mobile Sensor Data for Clinical Decision Support: Concept and Requirements. Studies in Health Technology and Informatics, 225, 562-566. doi:10.3233/978-1-61499-658-3-562

Denecke K. (2016). Automatic Analysis of Critical Incident Reports: Requirements and Use Cases. Studies in Health Technology and Informatics, 223, 85-92. doi:10.3233/978-1-61499-645-3-85

Deng Y., Declerck T., Lendvai P., Denecke K. (2016) The Generation of a Corpus for Clinical Sentiment Analysis. In: H. Sack et al. (eds.): The Semantic Web. Volume 9989 of the series Lecture Notes in Computer Science, 2016, 311-324.

Holm, J. Bignens, S, Lehmann, M., Bürkle, T. & Nüssli, S. (2016). Institute for Medical Informatics. Clinicum Sonderdruck Januar 2016, 1-16.

Holm, J., & Lehmann, M. (2016). 5 Jahre Bachelorstudium der Medizininformatik an der Berner Fachhochschule in Biel: Ein höchst belebendes Element. clinicum 4-16, 92-94.

Lehmann, M., Mössner, D., Schaad, P., Holm, J., Bürkle, T., & Denecke, K. (2016). Active and Assisted Living: der «intelligente Kleiderschrank» & Spital der Zukunft Live: Transformation in das Gesundheitswesen 2.0. FOCUS Nr. 29, 9-12.

Löbe, M., Ganslandt, T., Lotzmann, L., Mate, S., Christoph, J., Baum, B., Sariyar, M., Wu, J., & Stäubert, S. (2016). Simplified Deployment of Health Informatics Applications by Providing Docker Images. Stud Health Technol Inform, 228,643-647.

Nüssli, S., Schnyder, F., Zenhäusern, R., & Bosshart, K. (2016). Improving Patient Safety with a Mobile Application for Patients with Peripherally Inserted Central Venous Catheters (PICC). Studies in Health Technology and Informatics, 2016(225), 952-953. doi:10.15265/IY-2016-009.

Pfistermeister, B., Sedlmayr B., Patapovas, A., Suttner, G., Tektas, O., Tarkhov, A., Kornhuber, J., Fromm, M.F., Bürkle, T., Prokosch, HU., & Maas, R. (2016). Development of a Standardized Rating Tool for Drug Alerts to Reduce Information Overload. Methods Inf Med. 2016 Dec 7;55(6):507-515. doi: 10.3414/ME16-01-0003.

Prasser, F., & Sariyar, M. (2016). Anonymisierung medizinischer Individualdaten. In: J. Drepper, S. Semler (Eds.): IT-Infrastrukturen in der patientenorientierten Forschung. Aktueller Stand und Handlungsbedarf, 2016, 213-224.

Schaad, P., Basler, S., Medini, M., Wissler, I., Bürkle, T., & Lehmann, M. (2016). The «Intelligent Wardrobe». Studies in Health Technology and Informatics, 2016;225:213-7.

Schapranow, M., Uflacker, M., Sariyar, M., Semler, S.C., Fichte, J., Schielke, D., Ekinci, K., & Zahn, T. (2016). Towards an integrated health research process: A cloud-based approach. BigData 2016, 2813-2818.

Sariyar, M., & Schluender, I. (2016). Reconsidering anonymization-related concepts and the term “identification” against the backdrop of the European legal framework. Biopreservation and Biobanking, 14(5),367-374.

Sariyar, M. (2016). Maschinelle Lernverfahren für nieder- und hochdimensionale Probleme. Habilitationsschrift 2016.

Schmidtmann, I., Sariyar, M., Borg, A., Gerold-Ay, A., Heidinger, O., Hense, H.W., Krieg, V., & Hammer, G.P. (2016). Quality of record linkage in a highly automated cancer registry that relies on encrypted identity data. GMS Med Inform Biom Epidemiol, 12(1).

Zahnd, D. (2016). Der direkte Weg zur Health Excellence - Voneinander Lernen – Netzwerke als entscheidender Schlüssel zum Erfolg. Clinicum 4-16.

Zahnd, D. (2016). Prozessautomatisation als Erfolgsfaktor. Swiss Engineer 9.

Bignens, S. (2015). MIDATA – Bürger-zentrierte Zweitnutzung von Gesundheitsdaten. FOCUS, Nr.28, 11-13.

Castellanos, I., Kraus, S., Toddenroth, D., Prokosch, H. U., & Bürkle, T. (2015). Using Arden Syntax Medical Logic Modules to reduce overutilization of laboratory tests for detection of bacterial infections-Success or failure?. Artif Intell Med.

Denecke, K. (2015). Health Web Science. Social Media Data for Healthcare. Springer, ISBN 978-3-319-20581-6.
Denecke, K., & Deng, Y. (2015). Sentiment analysis in medical settings – new opportunities and challenges. Artificial Intelligence in Medicine, 64(1), 17-27. doi:10.1016/j.artmed.2015.03.006

Denecke, K., Faehnrich, C., & et al. (2015). Surveillance and Outbreak Response Management System (SORMAS) to support the control of the Ebola virus disease (EVD) outbreak in West-Africa. Euro Surveill, 20(12). pii=21071

Gasenzer, R. (2015). Was ist Gesundheit? Von Visionen und steten Tropfen. asut-Bulletin, 1, 20-21.

Holm, J. (2015). Forschung und Innovation am Institute for Medical Informatics (I4MI). FOCUS, Nr.28, 50-51.

Holm, J. (2015). Prix d'excellence 2015 für herausragende Medizininformatikprojekte. Clinicum, 5-15, 46-48.

Holm, J. (2015). Schweizweit erstes Institute for Medical Informatics. Clinicum, 5-15, 45.

Holm, J., Bürkle, T., & Lehmann, M. (2015). DAS EIGENE VIRTUELLE PATIENTENDOSSIER. ALSO Publikationen, 2, 8-9.

Holm, J., Bürkle, T., & Lehmann, M. (2015). DER NEUE STUDIENGANG MEDIZININFORMATIK. ALSO Publikationen, 1, 6-7.

Holm, J., Bürkle, T., & Lehmann, M. (2015). MEDIZININFORMATIK KANN DIE PATIENTENSICHERHEIT DEUTLICH VERBESSERN. ALSO Publikationen, 3, 8-9.

Holm, J., Bürkle, T., Gasenzer, R., von Kaenel, F., Nüssli, S., Bignens, S., Kim, S., & Lehmann, M. (2015). A Novel Approach to Teach Medical Informatics. Volume 216: MEDINFO 2015: eHealth-enabled Health, 1011-1011.

Lehmann, M., & Holm, J. (2015). Schliesslich geht es um Frau Brönnimann. Clinicum Das Fachmagazin mit Format für Spital und Heim, Sonderdruck Dezember 2015, 2-4.

Lehmann, M., Bürkle, T., & Holm, J. (2015). EIN SMART HOME FÜR BRÖNNIMANNS. ALSO Publikationen, 5, 8-9.

Lehmann, M., Bürkle, T., & Holm, J. (2015). IOT KOMMT BEI DEN MENSCHEN AN. ALSO Publikationen, 4, 8-9.

Lehmann, M., Nüssli S., & Holm, J. (2015). Im Fokus: Patientensicherheit, eHealth und Apps. Clinicum, 5-14, 76-80.

Mate, S., Köpcke, F., Toddenroth, D., Martin, M., Prokosch, H. U., Bürkle, T., & Ganslandt T. (2015). Ontology-based data integration between clinical and research systems. PLoS One, 10(1).

Meier, F., Maas, R., Sonst, A., Patapovas, A., Müller, F., Plank-Kiegele, B., Pfistermeister, B., Schöffski, O., Bürkle, T., & Dormann, H. (2015). Adverse drug events in patients admitted to an emergency department: an analysis of direct costs. Pharmacoepidemiol Drug Saf, 24(2), 176-186.

Pfeifer, P., Sariyar, M., Eggermann, T., Zerres, K., Vernaleken, I., Tüscher, O., & Fehr C. (2015). Alcohol Consumption in Healthy OPRM1 G Allele Carriers and Its Association with Impulsive Behavior. Alcohol and Alcoholism. 50(4), 379-384.

Roessler, J., Ammerpohl, O., Gutwein, J., Steinemann, D., Schlegelberger, B., Weyer, V., Sariyar, M. et al. (2015). The CpG island methylator phenotype in breast cancer is associated with the lobular subtype. Epigenomics, 7(2),187-199.

Sariyar, M., & Borg, A. (2015). Deterministic Linkage as a Preceding Filter for Other Record Linkage Methods. International Journal of Information Technology & Decision Making. 14(3),521-533.

Sariyar, M., Schluender, I., Smee, C., & Suhr, S. (2015). Sharing and reuse of sensitive data and samples: supporting researchers in identifying ethical and legal requirements. Biopreservation and Biobanking, 13(4),263-70.

Sariyar M. (2015). How to justify avoidance of communications related to death anxiety in the health care system. Med Health Care Philos, 18(3), 353-362.

Siddiqui, R., Sariyar, M., Seehaus, C., & Semler, S.C. (2015). Statusreport 2015 des Deutschen Biobanken-Registers; in: Hummel M et al. 4. Nationales Biobanken-Symposium - Biobankennetzwerke als Schrittmacher der medizinischen Forschung.

Wagner, S., Beckmann, M. W., Wullich, B., Seggewies, C., Ries, M., Bürkle, T., & Prokosch, H. U. (2015). Analysis and classification of oncology activities on the way to workflow based single source documentation in clinical information systems. BMC Medical Informatics and Decision Making, 15:107, doi: 10.1186/s12911-015-0231-x.

Ammenwerth, E., Aly, A. F., Bürkle, T., Christ, P., Dormann, H., Friesdorf, W., Haas, C., Haefeli, W. E., Jeske, M., Kaltschmidt, J., Menges, K., Möller, H., Neubert, A., Rascher, W., Reichert, H., Schuler, J., Schreier, G., Schulz, S., Seidling, H. M., Stühlinger, W., & Criegee-Rieck, M. (2014). Memorandum on the Use of Information Technology to Improve Medication Safety. Methods Inf Med, 53(5), 336-43. doi:10.3414/ME14-01-0040

Grünert, D., Schrei, P., Holm, J., & Lehmann, M. (2014). Mobile Vitalkurve. Swiss Medical Informatics, 30, 45-47.

Krumm, R., Semjonow, A., Tio, J., Duhme, H., Bürkle, T., Haier, J., Dugas, M., & Breil, B. (2014). The need for harmonized structured documentation and chances of secondary use - Results of a systematic analysis with automated form comparison for prostate and breast cancer. J Biomed Inform, 51, 86-99. doi:10.1016/j.jbi.2014.04.008

Maier, C., Bürkle, T., Prokosch, H. U., & Ganslandt, T. (2014). Case-based Visualization of a Patient Cohort using SEER Epidemiologic Data. Stud Health Technol Inform, 198, 133-40.

Meier, F., Maas, R., Sonst, A., Patapovas, A., Müller, F., Plank-Kiegele, B., Pfistermeister, B., Schöffski, O., Bürkle, T., & Dormann, H. (2014). Adverse drug events in patients admitted to an emergency department: an analysis of direct costs. Pharmacoepidemiol Drug Saf, 24(2), 176-86. doi:10.1002/pds.3663

Müller, F., Dormann, H., Pfistermeister, B., Sonst, A., Patapovas, A., Vogler, R., Hartmann, N., Plank-Kiegele, B., Kirchner, M., Bürkle, T., & Maas, R. (2014). Application of the Pareto principle to identify and address drug-therapy safety issues. Eur J Clin Pharmacol, 70(6), 72-36. doi:10.1007/s00228-014-1665-2

Patapovas, A., Pfistermeister, B., Tarkhov, A., Terfloth, L., Maas, R., Fromm, M. F., Kornhuber, J., Prokosch, H. U., & Bürkle, T. (2014). The effect object paradigma means to support medication safety with clinical decision support. Stud Health Technol Inform, 205, 1065-9.

Pfistermeister, B., Saß, A., Criegee-Rieck, M., Bürkle, T., Fromm, M. F., & Maas, R. (2014). Inconsistencies and misleading information in officially approved prescribing information from three major drug markets. Clin Pharmacol Ther, 96(5), 616-24. doi:10.1038/clpt.2014.156

Sariyar, M., Schumacher, M., & Binder, H. (2014). A boosting approach for adapting the sparsity of risk prediction signatures based on different molecular levels. Stat Appl Genet Mol Biol, 13(3), 343–57.

Sariyar, M., Hoffmann, I., & Binder, H. (2014). Combining techniques for screening and evaluating interaction terms on high-dimensional time-to-event data. BMC Bioinformatics, 15(1), 58.

Roth, K.E., Mueller, R., Schwand, E., Maier, G.S., Schmidtmann, I., Sariyar, M., et al. (2014). Open versus endoscopic bone resection of the dorsolateral calcaneal edge: a cadaveric analysis comparing three dimensional CT scans. J Foot Ankle Res, 7(1), 56.

Toddenroth, D., Ganslandt, T., Castellanos, I., Prokosch, H. U., & Bürkle, T. (2014). Employing heat maps to mine associations in structured routine care data. Artif Intell Med, 60(2), 79–88. doi:10.1016/j.artmed.2013.12.003

Vollmer, A. M., Prokosch, H. U., & Bürkle, T. (2014). Identifying barriers for implementation of computer based nursing documentation. Stud Health Technol Inform, 201, 94-101.

Zahnd, D.W., & Heberer, M. (2014). Der Weg der Schweiz – Umgang und Wirkung von Qualitätsindikatoren und Transparenz. in: Jörg Martin, Oda Rink, Josef Zacher (Hrsg.). Handbuch IQM. Medizinisch Wissenschaftliche Verlagsgesellschaft MWV. Berlin.

Zunner, C., Ganslandt, T., Prokosch, H. U., & Bürkle, T. (2014). A reference architecture for semantic interoperability and its practical application. Stud Health Technol Inform, 198, 40-6.